Published Papers:
Multivariate Analysis of Functional Metagenomes part 1 part 2. Elizabeth A. Dinsdale, Robert A. Edwards, Barbara Bailey, Imre Tuba, Sajia Akhter, Katelyn McNair, Robert Schmieder, Naneh Apkarian, Michelle Creek, Eric Guan, Mayra Hernandez, Catherine Isaacs, Chris Peterson, Todd Regh, Vadim Ponomarenko, under review.
Weighting Schemes to Minimize Coverage Bias in Internet Surveys. Kristin A. Duncan, Craig A. Massey, under review.
Number Theory of Matrix Semigroups. Donald Adams, Rene Ardila, Nick Baeth, David Hannasch, Audra Kosh, Hanah McCarthy, Vadim Ponomarenko, Ryan Rosenbaum, Journal of Linear Algebra and its Applications (434) 2011, pp. 694-711.
Bifurcus Semigroups and Rings. Donald Adams, Rene Ardila, David Hannasch, Audra Kosh, Hanah McCarthy, Vadim Ponomarenko, Ryan Rosenbaum, Involve 2 (3) 2009, pp. 351-356.
The Geometry and Motion of Nematode Sperm Cells. Evgeny Demekhin, Nicole Haugen, Brian Ibanez, Jerome Lederman, Kaitlyn Murphy, Diana Verzi, and Debra Witczak. Cell Motility and the Cytoskeleton 66 (6) June 2009, pp. 317-327.
2009 Final Reports:
A Large-Scale Statistical Survey of Environmental Metagenomes. Naneh Apkarian, Michelle Creek, Eric Guan, Mayra Hernandez, Kate Isaacs, Chris Peterson, Todd Regh.
Diagnosing Teacher Knowledge: A New Model. Bridget Druken, Laura Giberson, Cynthia Lopez, Jessica McCreary, Caitlyn O'Connor, Amanda Paganin, Lauren Susoeff.
2008 Final Reports:
The Geometry and Motion of Nematode Sperm Cells, Evgeny Demekhin, Nicole Haugen, Brian Ibanez, Jerome Lederman, Kaitlyn Murphy, Diana Verzi, Debra Witczak.
Matrix Number Theory: Factorization in Integral Matrix Semigroups, Donald Adams, Rene Ardila, David Hannasch, Audra Kosh, Hanah McCarthy, Vadim Ponomarenko, Ryan Rosenbaum.
2007 Final Reports:
Using Category Theory to Justify EvoHop, David Aaby.
Eigenvector Centrality for Decomposable Markov Chains, Kristen Mecadon, Megan Schneck, Annalinda Arroyo, Karl Heinz Hoffman, Jim Nulton, Peter Salamon.
PHACCS III: A Tool for Predicting Environmental Characteristics of Bacteriophage, Justin Domes, Bridget Druken, Peter Salamon.
Evolutionary Protein Distances to Phage Evolution Model, Andrew Detzel.
Towards a Phylogeny of Bacteriophage via Protein Importance Ranking, Kevin Manley.
Weighting for Coverage Bias in Internet Surveys, Zachary Boboth, Alisha Zimmer, Mark Scott, Eloise Hilarides, Donovan Gromet, Craig Massey.
