Next Generation Sequecing

Links:

Fast QC http://www.bioinformatics.babraham.ac.uk/projects/fastqc
PRINSEQ http://edwards.sdsu.edu/cgi-bin/prinseq/prinseq.cgi
National Center for Biotechnology Information
      GenBank
      EST Database
http://www.ncbi.nlm.nih.gov
      http://www.ncbi.nlm.nih.gov/genbank 
      http://www.ncbi.nlm.nih.gov/nucest
Transcriptomes
      IKP
      Big Plant

http://www.onekp.com
http://bio.nyu.edu/bp
Brassicales Alignment Project http://www.brassica.info/resource/sequencing/bmap.php 
iPlant Collaborative http://www.iplantcollaborative.org