SYLLABUS

 

Biology 535 Plant Ecology                                                                                   Spring 2005

Prerequisites: Biol 354 strongly recommended                                    Professor: Janet Franklin

Lecture: TU TH 1230-1345 LS132                                                                            Office: PS145

Lab:TH 1400-1640 LS126 (or elsewhere by arrangement)                       Office Phone: 594 5491

Office Hours*: M 1300-1400; Tu 1400-1500; F 1400-1500 and by apt         Email: janet@sciences.sdsu.edu

(*Except no office hours 2/8, 3/8, 3/14, 3/15, 4/5, 5/3, 5/13)

 

CONTACTING ME: See or call me during office hours or by appointment.  Leave messages, etc., in my Biology department mailbox the main office, north Life Sciences. Email me. Leave me voicemail.

 

COURSE LEARNING OBJECTIVES

 

After taking this course students should be able to:

 

The following topic areas will be addressed in the three parts of the class:

A.                  Plants and the physical environment – ecophysiology of photosynthesis, water relations, energy balance and nutrient requirements; ecosystem processes: the role of plants in biogeochemical cycles

B.                 Plant evolutionary and population ecology – the process and outcome of plant evolution and population structure, growth and decline; plant life histories

C.                 Plant communities – interactions of plants with other plants and with animals: competition, herbivory, disease; community dynamics: disturbance, succession; communities in landscapes: classifying and comparing communities

 

COURSE MATERIALS AND SUPPLIES

 

·         REQUIRED TEXTBOOK Gurevitch, J, Scheiner, SM and Fox, GA, 2002, The Ecology or Plants, Sinauer Associates.

·         Biology 535 Ecobeaker Lab Exercises by Simbiotic Software, available at bookstore (buying the manual gives you access to use of the software)

·         Other printed course materials, including this syllabus, lecture outlines, additional handouts (if any), other lab and field trip exercises, and any additional reading materials, will be posted on the course Blackboard (Bb) -- http://blackboard.sdsu.edu/  You are responsible for printing your own copies of these and bringing them to class/lab as needed.  Therefore, you will need regular access to a computer with an internet connection and a printer.  If you are not familiar with Bb, please consider taking a workshop at the library on how to use it. (Adobe Acrobat reader free software (http://www.adobe.com/products/acrobat/readermain.html for materials distributed in PDF format)

·         A notebook (bound or spiral, lined or grids) will be needed for labs, mainly for note-taking during the field trips.  You will occasionally be asked to turn in your lab notebook.  Most lab report will be typed and handed in separate from the lab notebook, however.

·         A blank floppy disk or zip disk or flash disk may be useful in the lab (or if you have Web-based email, you email yourself copies of work you do in lab).

·         There will be some minor expenses associated with the field trips – you will have to provide your own transportation and so car-pooling and sharing gas costs and other expenses (some places may have small parking or usage fees) is expected and encouraged.

 

GROUND RULES

 

Attend class and lab.  Ask questions. Be on time.  If you bring food to lecture, clean up your trash. Absolutely no food or drink in computer lab.  No late assignments will be accepted.  Missing an exam will only be excused in case of emergency with appropriate documentation (a note from doctor, etc.).  Cheating is rarely an issue in ecology courses; however, please note that University regulations concerning plagiarism and cheating (see General Catalog) will be strictly enforced.

 

COURSE GRADE

 

                        Assignment                                                  Per Cent              Points

                        exam #1                                                               20%                  200

                        exam #2                                                               20%                  200

                        exam #3                                                               25%                  250

                        Quizzes                                                                 5%                    50

                        Class and lab participation (attendance)               3%                    30

                        Lab presentation                                                    2%                    20

                        12 Lab reports (15-25 pts each)                          25%                  250

 

ASSIGNMENTS AND STUDENT RESPONSIBILITIES

 

Lectures: Lectures will emphasize main concepts from assigned reading, illustrated with examples.  Lecture outlines will be posted on Bb.  Complete assigned readings before class.

 

Quizzes:  There will be several unscheduled (“surprise”) quizzes given during lecture or lab, covering assigned reading or material previously covered in lecture.  No make-up quizzes will be given.  The lowest score will be dropped.

 

Exams:  There will be three exams – the last one is given during the final exam period.  They will cover the assigned reading, emphasizing material covered in lecture.  Each exam will cover the material assigned during each third of the course – none of the exams are comprehensive.  The exams may include short-answer, fill in the blank, label the diagram, multiple choice, and matching questions.  Lecture outlines should be used as a ‘study guide.’

 

LABORATORY

 

Laboratory activities will include computer laboratory exercises and field trips.  Field trip activities will include observation and data collection (sometimes both).  Several of the computer-based labs will be based on the EcoBeaker simulation software (see Schedule) and those lab exercises are available through the campus bookstore.  Other computer-based exercises will involve analysis of ecological data.  All software will be available in the lab.  All other lab exercises, including descriptions of field trip activities, will be posted on Bb in folders under Assignments.

 

Off-Campus Field trips:  There are several half-day field trips that take place during class/lab time (roughly 12-5 pm) Thursdays.  There will also be three Saturday field trips and you are required to attend at least one of them (see Schedule).  These are required and important class activities.  If you are not willing to sign the waiver form and participate in any of these off campus activities, alternative assignments will be provided (see below).

 

Lab reports: Normally, lab exercises will be completed during the lab period and brief reports will be completed outside of class.  The format of each report will be specified in the lab exercise.  All lab reports due one week after the corresponding lab exercise/activity, average value about 15-25 points each (less for easier, shorter reports, more for detailed longer reports with calculations).  Occasionally you will also be asked to turn in your lab notebook.

 

Presentation:  At the end of the semester, small groups of students will give a brief (10 minute) oral presentation about one of the lab activities (each group must choose a different lab to discuss).

 

Alternative Assignments -- Activities Substituting for Off-Campus Field Trips

These alternative assignments should be done ONLY if you are not willing to sign any waiver forms OR if you there is no possible way you can attend any Saturday field trips – must be approved in advance by Professor.  Two activities substitute for all day field trip.

1.       Attend the talk given at a monthly meeting (3rd Tuesday, 7 pm, Balboa Park) of the local chapter of California Native Plant Society (http://www.cnpssd.org/ ), or participate in one of their activities (field trips or volunteer activities). 

2.       Attend an educational talk, workshop, canyoneers hike or other activity at the San Diego Natural History Museum (http://www.sdnhm.org/ ), Zoological Society (http://www.sandiegozoo.org/ ), Mission Trails Regional Park (http://www.mtrp.org/ ), Quail Botanical Garden (http://www.qbgardens.com/  ), a local California State Park, or any other local group if it is related to plants, plant ecology, or botany. 

3.       Attend a Ecology and Evolutionary Biology seminar (Mondays, 4-5 pm, LS101; url: http://www.bio.sdsu.edu/eb/eb.html and click on the link to Seminars), or any other seminar lecture on campus (or at another university in the region) if it is related to plants, plant ecology, or botany.

·          Write a brief (~2 page) but logically-structured activity report describing what, where, when, who.  What was the main point of the talk, or of the activity?  What were the “results”?  What concepts from class were involved?


CONDITIONAL COURSE CALENDAR (Subject to modification)

Week

Date

Topic

Required Reading

Lab Activity

Assignments Due

1

1/25

Plant growth, reproduction

(1) 8

 

 

 

1/27

“

 

Brief introduction to computer lab (no report)

 

Sat

1/29

 

 

Optional Saturday Field Trip Cowles Mtn*

 

2

2/1

Photosynthesis and light

2

 

 

 

2/3

“

 

Review: plant structure and classification

(no report for week 1 lab)

3

2/8

Water and energy balance

3

 

 

 

2/10

“

 

EcoBeaker:: Limiting Nutrients

Report 1 for week 2 lab

4

2/15

Soil environment, nutrients

4

 

 

 

2/17

“

 

Campus lab visit: SERG

Report 2 for week 3 lab

5

2/22

Ecosystem processes

15

 

 

 

2/24

“

 

Ecobeaker: Prairie sampling

Report 3 for week 4 lab

6

3/1

EXAM 1

8, 2, 3, 4, 15

 

 

 

3/3

(field trip)

 

Local Field Trip: CRES seed bank project

Report 4 for week 5 lab

7

3/8

Plant evolution I

5

 

 

 

3/10

Plant evolution II

6

Ecobeaker: Varieties of competition

Report 5 for week 6 lab

8

3/15

Plant populations (guest)

7

 

 

 

3/17

(field trip)

 

Local Field trip Santa Margarita Ecol Reserve

Report 6 for week 7 lab

9

3/22

Competition

10

 

 

 

3/24

“

 

Enter, analyze SMER data in computer lab

(no report due)

3/28-

4/1

SPRING

BREAK

 

 

10

4/5

Herbivory, pathogens

11

 

 

 

4/7

Communities

12

Plant community data lab (computer)

Report 7 for week 8/9 lab

Sat

4/9

 

 

Optional Saturday Field trip Anza Borrego*

 

11

4/12

Exam 2

5, 6, 7, 10, 11

 

 

 

4/14

(field trip)

12

Local Field Trip: Torrey Pines

Report 8 for week 10 lab

12

4/19

Community Classification

16

 

 

 

4/21

“

 

Classification lab  (computer)

Report 9 for week 11

13

4/26

Disturbance, Succession

13

 

 

 

4/28

“

 

Ecobeaker: Intermediate disturbance hypoth.

Report 10 for week 12 lab

14

5/3

Diversity, Rarity, Invasion

14

 

 

 

5/5

“

 

Presentations

Report 11 for week 13 lab

Sat

5/7

 

 

Saturday Field trip Cuyamaca, Laguna*

 

15

5/10

Biomes (if time permits)

19

 

 

 

5/13

NO CLASS

 

 

(no report due)

(FINAL) EXAM 3 Tu May 17 1300-1500

12, 16, 13, 14, (19?)

Report 12* (Sat. field trip)

* required to attend one of the Saturday field trips and write Report 12 about the trip you attend.